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Fan Kiat Chan, Yashraj Bhosale, Tejaswin Parthasarathy, and Mattia Gazzola (2022): Three-Dimensional Geometry and Topology Effects in Viscous Streaming, Journal of Fluid Mechanics, Cambridge University Press (CUP), Vol 933

Seung Hyun Kim, Heng-Sheng Chang, Chia-Hsien Shih, Naveen Kumar Uppalapati, Udit Halder, Girish Krishnan, Prashant G. Mehta, and Mattia Gazzola (2022): A Physics-Informed, Vision-Based Method to Reconstruct All Deformation Modes in Slender Bodies, IEEE, 2022 International Conference on Robotics and Automation (ICRA), Philadelphia, PA, USA

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Hiroki Nagakura, and David Vartanyan (2022): Efficient Method for Estimating the Time Evolution of the Proto-Neutron Star Mass and Radius from a Supernova Neutrino Signal, Monthly Notices of the Royal Astronomical Society, Oxford University Press (OUP), Vol 512, Num 2, pp2806--2816

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Kejian Qu, Hrishikesh Bale, Zachary W. Riedel, Junehu Park, Leilei Yin, Andr\'e Schleife, and Daniel P. Shoemaker (2022): Morphology and Growth Habit of the New Flux-Grown Layered Semiconductor KBiS$\less$sub$\greater$2$\less$/sub$\greater$ Revealed by Diffraction Contrast Tomography, Crystal Growth & Design, American Chemical Society (ACS), Vol 22, Num 5, pp3228--3234

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Yashraj Bhosale, Giridar Vishwanathan, Gaurav Upadhyay, Tejaswin Parthasarathy, Gabriel Juarez, and Mattia Gazzola (2022): Multicurvature Viscous Streaming: Flow Topology and Particle Manipulation, Proceedings of the National Academy of Sciences, Proceedings of the National Academy of Sciences, Vol 119, Num 36

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Alina Kononov, Alexandra Olmstead, Andrew D Baczewski, and Andr\'e Schleife (2022): First-Principles Simulation of Light-Ion Microscopy of Graphene, 2D Materials, IOP Publishing, Vol 9, Num 4, pp045023

Yashraj Bhosale, Nicholas Weiner, Alex Butler, Seung Hyun Kim, Mattia Gazzola, and Hunter King (2022): Micromechanical Origin of Plasticity and Hysteresis in Nestlike Packings, Physical Review Letters, American Physical Society (APS), Vol 128, Num 19

David LeBauer, et al. (2021): What Does TERRA-REF's High Resolution, Multi Sensor Plant Sensing Public Domain Data Offer the Computer Vision Community?, Proceedings of the IEEE/CVF International Conference on Computer Vision, IEEE/CVF International Conference on Computer Vision 2021, Montreal, QC, Canada

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N. Naughton, J. Sun, A. Tekinalp, T. Parthasarathy, G. Chowdhary, and M. Gazzola (2021): Elastica: A Compliant Mechanics Environment for Soft Robotic Control, IEEE Robotics and Automation Letters

Chao Ren, Justin Dulay, Gregory Rolwes, Duke Pauli, Nadia Shakoor, Abby Stylianou (2021): Multi-resolution Outlier Pooling for Sorghum Classification, Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition

Abby Stylianou, Robert Pless, Nadia Shakoor, Todd Mockler (2021): Classification and Visualization of Genotype x Phenotype Interactions in Biomass Sorghum, Proceedings of the IEEE/CVF International Conference on Computer Vision

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Soonpil Kang, , Sharbel Nashar, Elizabeth R. Livingston, and Arif Masud (2021): Weakly Imposed Boundary Conditions for Shear-Rate Dependent Non-Newtonian Fluids: Application to Cardiovascular Flows, Mathematical Biosciences and Engineering, American Institute of Mathematical Sciences (AIMS), Vol 18, Num 4, pp3855--3886

Burkhard Militzer, Felipe Gonz\'alez-Cataldo, Shuai Zhang, Kevin P. Driver, and Fran\ccois Soubiran (2021): First-Principles Equation of State Database for Warm Dense Matter Computation, Physical Review E, American Physical Society (APS), Vol 103, Num 1

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Vasit Sagan, Maitiniyazi Maimaitijiang, Sidike Paheding, Sourav Bhadra, Nichole Gosselin, Max Burnette, Jeffrey Demieville, Sean Hartling, David LeBauer, Maria Newcomb, Duke Pauli, Kyle T. Peterson, Nadia Shakoor, Abby Stylianou, Charles S. Zender, and Todd C. Mockler (2021): Data-Driven Artificial Intelligence for Calibration of Hyperspectral Big Data, IEEE Transactions on Geoscience and Remote Sensing, Institute of Electrical and Electronics Engineers (IEEE), Vol 60, pp1--20

David LeBauer, Max Burnette, Noah Fahlgren, Rob Kooper, Kenton McHenry, and Abby Stylianou (2021): What Does TERRA-REF's High Resolution, Multi Sensor Plant Sensing Public Domain Data Offer the Computer Vision Community?, IEEE, 2021 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW), Virtual/Online/Canada

Mohammad Heiranian, Yechan Noh, and Narayana R. Aluru (2021): Dynamic and Weak Electric Double Layers in Ultrathin Nanopores, The Journal of Chemical Physics, AIP Publishing, Vol 154, Num 13, pp134703

Alexander E. Doran, and So Hirata (2021): Stochastic Evaluation of Fourth-Order Many-Body Perturbation Energies, The Journal of Chemical Physics, AIP Publishing, Vol 154, Num 13, pp134114

Xiao Zhang, Sebastian Achilles, Jan Winkelmann, Roland Haas, Andr\'e Schleife, and Edoardo Di Napoli (2021): Solving the Bethe-Salpeter Equation on Massively Parallel Architectures, Computer Physics Communications, Elsevier BV, Vol 267, pp108081

Henrique V\'azquez, Alina Kononov, Andreas Kyritsakis, Nikita Medvedev, Andr\'e Schleife, and Flyura Djurabekova (2021): Electron Cascades and Secondary Electron Emission in Graphene Under Energetic Ion Irradiation, Physical Review B, American Physical Society (APS), Vol 103, Num 22

O. Herrfurth, S. Richter, M. Rebarz, S. Espinoza, J. Z\'u\ niga-P\'erez, C. Deparis, J. Leveillee, A. Schleife, M. Grundmann, J. Andreasson, and R. Schmidt-Grund (2021): Transient Birefringence and Dichroism in ZnO Studied with Fs-Time-Resolved Spectroscopic Ellipsometry, Physical Review Research, American Physical Society (APS), Vol 3, Num 1

Chengxi Zhao, Kisung Kang, Joerg C. Neuefeind, Andr\'e Schleife, and Daniel P. Shoemaker (2021): In-Plane Magnetic Structure and Exchange Interactions in the High-Temperature Antiferromagnet $\Less$mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"$\greater$$\less$mml:mrow$\greater$$\less$mml:msub$\greater$$\less$mml:mi$\greater$Cr$\less$/mml:mi$\greater$$\less$mml:mn$\greater$2$\less$/mml:mn$\greater$$\less$/mml:msub$\greater$$\less$mml:mi$\greater$Al$\less$/mml:mi$\greater$$\less$/mml:mrow$\greater$$\less$/mml:math$\greater$, Physical Review Materials, American Physical Society (APS), Vol 5, Num 8

Chuanxu Ma, Zhongcan Xiao, Peter V. Bonnesen, Liangbo Liang, Alexander A. Puretzky, Jingsong Huang, Marek Kolmer, Bobby G. Sumpter, Wenchang Lu, Kunlun Hong, Jerzy Bernholc, and An-Ping Li (2021): On-Surface Cyclodehydrogenation Reaction Pathway Determined by Selective Molecular Deuterations, Chemical Science, Royal Society of Chemistry (RSC), Vol 12, Num 47, pp15637--15644

Yashraj Bhosale, Tejaswin Parthasarathy, and Mattia Gazzola (2021): A Remeshed Vortex Method for Mixed Rigid/soft Body Fluid-Structure Interaction, Journal of Computational Physics, Elsevier BV, Vol 444, pp110577

Xiaotian Zhang, Noel Naughton, Tejaswin Parthasarathy, and Mattia Gazzola (2021): Friction Modulation in Limbless, Three-Dimensional Gaits and Heterogeneous Terrains, Nature Communications, Springer Science and Business Media LLC, Vol 12, Num 1

Elaad Applebaum, Alyson M. Brooks, Charlotte R. Christensen, Ferah Munshi, Thomas R. Quinn, Sijing Shen, and Michael Tremmel (2021): Ultrafaint Dwarfs in a Milky Way Context: Introducing the Mint Condition DC Justice League Simulations, The Astrophysical Journal, American Astronomical Society, Vol 906, Num 2, pp96

Ferah Munshi, Alyson M. Brooks, Elaad Applebaum, Charlotte R. Christensen, T. Quinn, and Serena Sligh (2021): Quantifying Scatter in Galaxy Formation at the Lowest Masses, The Astrophysical Journal, American Astronomical Society, Vol 923, Num 1, pp35

Bin Xu, Sebastian Meyer, Matthieu J. Verstraete, Laurent Bellaiche, and Bertrand Dup\'e (2021): First-Principles Study of Spin Spirals in the Multiferroic $\Less$mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"$\greater$$\less$mml:msub$\greater$$\less$mml:mi mathvariant="normal"$\greater$BiFeO$\less$/mml:mi$\greater$$\less$mml:mn$\greater$3$\less$/mml:mn$\greater$$\less$/mml:msub$\greater$$\less$/mml:math$\greater$, Physical Review B, American Physical Society (APS), Vol 103, Num 21

Alina Kononov, and Andr\'e Schleife (2021): Anomalous Stopping and Charge Transfer in Proton-Irradiated Graphene, Nano Letters, American Chemical Society (ACS), Vol 21, Num 11, pp4816--4822

Zijun Yang, Chunyuan Diao, and Bo Li (2021): A Robust Hybrid Deep Learning Model for Spatiotemporal Image Fusion, Remote Sensing, MDPI AG, Vol 13, Num 24, pp5005

Jiaojiao Wang, Xiaotian Zhang, Junehu Park, Insu Park, Evin Kilicarslan, Yongdeok Kim, Zhi Dou, Rashid Bashir, and Mattia Gazzola (2021): Computationally Assisted Design and Selection of Maneuverable Biological Walking Machines, Advanced Intelligent Systems, Wiley, Vol 3, Num 5, pp2000237

David LeBauer et al. (2020): Data From: TERRA-REF, An Open Reference Data Set from High Resolution Genomics, Phenomics, and Imaging Sensors, Dryad

Burkhard Militzer, Felipe Gonz\'alez-Cataldo, Shuai Zhang, Heather D. Whitley, Damian C. Swift, and Marius Millot (2020): Nonideal Mixing Effects in Warm Dense Matter Studied with First-Principles Computer Simulations, The Journal of Chemical Physics, AIP Publishing, Vol 153, Num 18, pp184101

Heng-Sheng Chang, Udit Halder, Chia-Hsien Shih, Arman Tekinalp, Tejaswin Parthasarathy, Ekaterina Gribkova, Girish Chowdhary, Rhanor Gillette, Mattia Gazzola, and Prashant G. Mehta (2020): Energy Shaping Control of a CyberOctopus Soft Arm, IEEE, 2020 59th IEEE Conference on Decision and Control (CDC)

Tixian Wang, Udit Halder, Heng-Sheng Chang, Mattia Gazzola, and Prashant G. Mehta (2020): Optimal Control of a Soft CyberOctopus Arm, IEEE, 2021 American Control Conference (ACC)

Marina A. Kasimova, Timothy Lynagh, Zeshan Pervez Sheikh, Daniele Granata, Christian Bernsen Borg, Vincenzo Carnevale, and Stephan Alexander Pless (2020): Evolutionarily Conserved Interactions Within the Pore Domain of Acid-Sensing Ion Channels, Biophysical Journal, Elsevier BV, Vol 118, Num 4, pp861--872

Antonio Suma, Alex Stopar, Allen W Nicholson, Matteo Castronovo, and Vincenzo Carnevale (2020): Global and Local Mechanical Properties Control Endonuclease Reactivity of a DNA Origami Nanostructure, Nucleic Acids Research, Oxford University Press (OUP), Vol 48, Num 9, pp4672--4680

Manohar H. Karigerasi, Kisung Kang, Garrett E. Granroth, Arnab Banerjee, Andr\'e Schleife, and Daniel P. Shoemaker (2020): Strongly Two-Dimensional Exchange Interactions in the In-Plane Metallic Antiferromagnet $\Less$mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"$\greater$$\less$mml:mrow$\greater$$\less$mml:msub$\greater$$\less$mml:mi$\greater$Fe$\less$/mml:mi$\greater$$\less$mml:mn$\greater$2$\less$/mml:mn$\greater$$\less$/mml:msub$\greater$$\less$mml:mi$\greater$As$\less$/mml:mi$\greater$$\less$/mml:mrow$\greater$$\less$/mml:math$\greater$ Probed by Inelastic Neutron Scattering, Physical Review Materials, American Physical Society (APS), Vol 4, Num 11

Chunyuan Diao (2020): Remote Sensing Phenological Monitoring Framework to Characterize Corn and Soybean Physiological Growing Stages, Remote Sensing of Environment, Elsevier BV, Vol 248, pp111960

Lake A. Singh, William R. Whittecar, Marc D. DiPrinzio, Jonathan D. Herman, Matthew P. Ferringer, and Patrick M. Reed (2020): Low Cost Satellite Constellations for Nearly Continuous Global Coverage, Nature Communications, Springer Science and Business Media LLC, Vol 11, Num 1

Soumendu Bagchi, Harley T. Johnson, and Huck Beng Chew (2020): Strain-Controlled Dynamic Rotation of Twisted 2D Atomic Layers for Tunable Nanomechanical Systems, ACS Applied Nano Materials, American Chemical Society (ACS), Vol 3, Num 11, pp10878--10884

Sourav Bhadra, Vasit Sagan, Maitiniyazi Maimaitijiang, Matthew Maimaitiyiming, Maria Newcomb, Nadia Shakoor, and Todd C. Mockler (2020): Quantifying Leaf Chlorophyll Concentration of Sorghum from Hyperspectral Data Using Derivative Calculus and Machine Learning, Remote Sensing, MDPI AG, Vol 12, Num 13, pp2082

Ruijie D. Teo, Agostino Migliore, and David N. Beratan (2020): Mutation Effects on Charge Transport Through the P58c Iron-Sulfur Protein, Chemical Science, Royal Society of Chemistry (RSC), Vol 11, Num 27, pp7076--7085

Sourav Bhadra, Vasit Sagan, Maitiniyazi Maimaitijiang, Matthew Maimaitiyiming, Maria Newcomb, Nadia Shakoor, and Todd C. Mockler (2020): Quantifying Leaf Chlorophyll Concentration of Sorghum from Hyperspectral Data Using Derivative Calculus and Machine Learning, Remote Sensing, MDPI AG, Vol 12, Num 13, pp2082

Li, Zongyang, Abby Stylianou, and Robert Pless (2019): Learning to Correct for Bad Camera Settings in Large Scale Plant Monitoring, Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) Workshops, Vol 4

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Tania Chernov-Rogan, Eleonora Gianti, Chang Liu, Elisia Villemure, Andrew P. Cridland, Xiaoyu Hu, Elisa Ballini, Wienke Lange, Heike Deisemann, Tianbo Li, Stuart I. Ward, David H. Hackos, Steven Magnuson, Brian Safina, Michael L. Klein, Matthew Volgraf, Vincenzo Carnevale, and Jun Chen (2019): TRPA1 Modulation by Piperidine Carboxamides Suggests an Evolutionarily Conserved Binding Site and Gating Mechanism, Proceedings of the National Academy of Sciences, Proceedings of the National Academy of Sciences, Vol 116, Num 51, pp26008--26019

Ebrahim Babaeian, Paheding Sidike, Maria S. Newcomb, Maitiniyazi Maimaitijiang, Scott A. White, Jeffrey Demieville, Richard W. Ward, Morteza Sadeghi, David S. LeBauer, Scott B. Jones, Vasit Sagan, and Markus Tuller (2019): A New Optical Remote Sensing Technique for High-Resolution Mapping of Soil Moisture, Frontiers in Big Data, Frontiers Media SA, Vol 2

Jinfeng Liu, and Jason Swails, and John Z. H. Zhang, and Xiao He, and Adrian E. Roitberg (2018): A Coupled Ionization-Conformational Equilibrium Is Required To Understand the Properties of Ionizable Residues in the Hydrophobic Interior of Staphylococcal Nuclease, Journal of the American Chemical Society, American Chemical Society, Vol 140, Num 5, pp1639-1648

Reuben Budiardja, Timothy Bouvet, and Galen Arnold (2018): Application-level regression testing framework using Jenkins, Concurrency and Computation: Practice and Experience, John Wiley & Sons, Inc., Vol 30, Num 1 (Special issue of the Cray User Group, CUG 2017), ppe4339, Redmond, Washington, U.S.A.

Sivasakthya Mohan, Ruizhi Li, and Huck Beng Chew (2018): Local Stress Analysis of Partial Dislocation Interactions with Symmetrical-Tilt Grain Boundaries Containing E-Structural Units, Philosophical Magazine, Informa UK Limited, Vol 98, Num 25, pp2345--2366

Taishan Zhu, Krishnan Swaminathan-Gopalan, Kevin J. Cruse, Kelly Stephani, and Elif Ertekin (2018): Vibrational Energy Transport in Hybrid Ordered/Disordered Nanocomposites: Hybridization and Avoided Crossings of Localized and Delocalized Modes, Advanced Functional Materials, Wiley, Vol 28, Num 17, pp1706268

Brett Bode, Jim Glasgow, Michelle Butler, Sean Stevens, Nate Schumann, Frank Zago (2017): Implementing a Hierarchical Storage Management system in a large-scale Lustre and HPSS environment, presented at CUG 2017, Redmond, Washington, U.S.A.

Colin Maclean (2017): Python Usage Metrics on Blue Waters, presented at CUG 2017, Redmond, Washington, U.S.A.

Yan Yang, W. H. Matthaeus, T. N. Parashar, P. Wu, M. Wan, Y. Shi, S. Chen, V. Roytershteyn, and W. Daughton (2017): Energy Transfer Channels and Turbulence Cascade in Vlasov-Maxwell Turbulence, Physical Review E, American Physical Society (APS), Vol 95, Num 6

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Y. Kim, Y. Yang, X. Zhang, Z. Li, A. Vazquez-Guardado, I. Park, J. Wang, A. Efimov, Z. Dou, Y. Wang, J. Park, H. Luan, X. Ni, Y. Kim, J. Baek, Z. Xie, Z. Zhao, M. Gazzola, J. Rogers, and R. Bashir: Remote Control of Miniature Robots Integrating Biological Muscles and Battery-Free Wireless Optoelectronics, Science Robotics

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